JOBS mESC Library
TIP: you can make these jobs as your jobs, and then perform co-occupancy anaysis in your job list.
Factor Name Binding data Expr. data Perturbation Job Name
Cdx2 GSE16375 GSE16375 Overexpression mESC_Cdx2_O
Esrrb GSE11431 GSE26520 Knock-down/out mESC_Esrrb_D
Jarid2 "GSE18776,GSE19365" GSE31381 Overexpression mESC_Jarid2_O
Jarid2 "GSE18776,GSE19365" GSE26520 Knock-down/out mESC_Jarid2_D
Kdm5a GSE18776 GSE31381 Overexpression mESC_Kdm5a_O
Klf4 GSE11431 GSE16375 Overexpression mESC_Klf4_O
Klf4 GSE11431 GSE26520 Knock-down/out mESC_Klf4_D
Myc GSE11431 GSE16375 Overexpression mESC_Myc_O
Myc GSE11431 GSE26520 Knock-down/out mESC_Myc_D
Mycn GSE11431 GSE16375 Overexpression mESC_Mycn_O
Mycn GSE11431 GSE26520 Knock-down/out mESC_Mycn_D
Nanog GSE11431 GSE16375 Overexpression mESC_Nanog_O
Nanog GSE11431 GSE26520 Knock-down/out mESC_Nanog_D1
Nanog GSE11431 GSE26520 Knock-down/out mESC_Nanog_D2
Nr5a2 GSE19019 GSE16375 Overexpression mESC_Nr5a2_O
Nr5a2 GSE19019 GSE26520 Knock-down/out mESC_Nr5a2_D
Pou5f1 "GSE11431,GSE22934" GSE16375 Overexpression mESC_Pou5f1_O
Pou5f1 "GSE11431,GSE22934" GSE26520 Knock-down/out mESC_Pou5f1_D1
Pou5f1 "GSE11431,GSE22934" GSE26520 Knock-down/out mESC_Pou5f1_D2
Rest "GSE26680,GSE27844" GSE31381 Overexpression mESC_Rest_O
Rest "GSE26680,GSE27844" GSE26520 Knock-down/out mESC_Rest_D
Smad1 GSE11431 GSE16375 Overexpression mESC_Smad1_O
Sox2 GSE11431 GSE16375 Overexpression mESC_Sox2_O
Sox2 GSE11431 GSE26520 Knock-down/out mESC_Sox2_D
Stat3 GSE11431 GSE16375 Overexpression mESC_Stat3_O
Stat3 GSE11431 GSE26520 Knock-down/out mESC_Stat3_D
Suz12 "GSE11431,GSE13084,GSE19365,GSE18776" GSE16375 Overexpression mESC_Suz12_O
Suz12 "GSE11431,GSE13084,GSE19365,GSE18776" GSE26520 Knock-down/out mESC_Suz12_D
Tbx3 GSE19219 GSE31381 Overexpression mESC_Tbx3_O
Tbx3 GSE19219 GSE26520 Knock-down/out mESC_Tbx3_D
Tcfcp2l1 GSE11431 GSE31381 Overexpression mESC_Tcfcp2l1_O
Tcfcp2l1 GSE11431 GSE26520 Knock-down/out mESC_Tcfcp2l1_D
Nelfa GSE20530 GSE16375 Overexpression mESC_Nelfa_O
Nelfa GSE20530 GSE26520 Knock-down/out mESC_Nelfa_D
Other omics data
H3K4me3 ChIP-seq/ENCODE
H3K4me1 ChIP-seq/ENCODE
H3K27ac ChIP-seq/ENCODE
H3K27me3 ChIP-seq/ENCODE
H3K9me3 ChIP-seq/ENCODE
Open chromatin region DHS-seq/ENCODE
Long-range interaction ChIA-PET/GSE44067
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