GWASrap provides detailed annotation and prioritization results for current published or updated GWAS catalog:
GWAS catalog The result shows latest GWAS catalog data (up to FEB 2012), you can see GWASrap offers a very different representing style to GWAS catalog style. Users can easily check the published TAS by clicking the plot or inuptting the dbSNP number. LD parrtern is available for each SNP, user can rank the SNPs in that LD to select the more significant marker.
JohnsonDonnell The result shows a published GWAS dataset by Andrew D Johnson and Christopher J O'Donnell in BMC Medical Genetics, which is also a comprehensive dataset for GWAS by literature curation. After removing duplication, we got 50528 sinificat TASs with p-value < 0.001.
GWASrap provides catagory viewer for hot diseases/traits, the dataset curated from literature and published database:
Bipolar Disorder 4989 GWAS TASs (P-value < 0.0003) are collected for this disease.
Alzheimer's Disease 4627 GWAS TASs (P-value < 0.001) are collected for this disease.
Depression 3548 GWAS TASs (P-value < 0.001) are collected for this disease.
Parkinson Disease 2770 GWAS TASs (P-value < 0.001) are collected for this disease.
Diabetes Mellitus 2630 GWAS TASs (P-value < 0.001) are collected for this disease.
Amyotrophic Lateral Sclerosis 2306 GWAS TASs (P-value < 0.001) are collected for this disease.
Rheumatoid Arthritis 1733 GWAS TASs (P-value < 0.001) are collected for this disease.
HIV-1 Disease 1568 GWAS TASs (P-value < 0.001) are collected for this disease.
Hematopoietic System Disease 1403 GWAS TASs (P-value < 0.001) are collected for this disease.
Prostate Cancer 1370 GWAS TASs (P-value < 0.001) are collected for this disease.
Coronary Srtery Disease 1057 GWAS TASs (P-value < 0.001) are collected for this disease.
Schizophrenia 995 GWAS TASs (P-value < 0.0009) are collected for this disease.
Arteriopathy 947 GWAS TASs (P-value < 0.001) are collected for this disease.
Multiple Sclerosis 918 GWAS TASs (P-value < 0.001) are collected for this disease.
Crohn's Disease 770 GWAS TASs (P-value < 0.001) are collected for this disease.
Hypertension 723 GWAS TASs (P-value < 0.001) are collected for this disease.
Brease Cancer 405 GWAS TASs (P-value < 0.001) are collected for this disease.